Case Study 1: Single dataset analysis for gene expression data

This case study uses HTSanalyzeR2 to perform gene set over-representation analysis, enrichment analysis and enriched subnetwork analyses on a common gene expression profile.

Case Study 2: Time series analysis for CRISPR data

This case study uses a time series CRISPR genome-wide drop-out data as a demonstration to perform time series analysis.

Special Usage of HTSanalyzeR2

In case if you only have a list of genes and want to do hypergeometric test with gene sets having known functions