This case study uses HTSanalyzeR2 to perform gene set over-representation analysis, enrichment analysis and enriched subnetwork analyses on a common gene expression profile.
Porvide 3 case study for reference
This case study uses HTSanalyzeR2 to perform gene set over-representation analysis, enrichment analysis and enriched subnetwork analyses on a common gene expression profile.
This case study uses a time series CRISPR genome-wide drop-out data as a demonstration to perform time series analysis.
In case if you only have a list of genes and want to do hypergeometric test with gene sets having known functions
Contains the preprocessing, Hypergeometrics, Enrichment Subnetwork
a preprocess step including invalid input data removing, duplication removing, initial gene identifiers converting to Entrez ID and phenotype ordering.
Please contact to Correcting error and/or Giving advices. Thanks!